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Citation

If you use SeapoPym in your research, please cite our Model Description Paper:

BibTeX

@article{lehodey2026seapopym,
  title={SeapoPym v0.1: Implementation of the SEAPODYM low and mid trophic levels in Python with a flexible optimisation framework},
  author={Lehodey, J.V.},
  journal={Geoscientific Model Development},
  year={2026},
  publisher={Copernicus Publications}
}

Text Format

Lehodey, J.V. (2026). SeapoPym v0.1: Implementation of the SEAPODYM low and mid trophic levels in Python with a flexible optimisation framework. Geoscientific Model Development.

DOI

The paper DOI will be added here upon publication.

Software Citation

For citing the software specifically:

@software{seapopym2026,
  author = {Lehodey, Jules V.},
  title = {SeapoPym: Spatial Ecosystem And POpulation DYnamics Model},
  year = {2026},
  url = {https://github.com/SeapoPym/seapopym},
  version = {0.1.0}
}

Reproducibility

The exact code used in the GMD paper is available in this repository under the tag v0.1.0:

git clone https://github.com/SeapoPym/seapopym.git
cd seapopym
git checkout v0.1.0

Notebooks reproducing the paper results are in the paper_workflow/ directory.